LCOV - code coverage report
Current view: top level - src - input_cp2k_embed.F (source / functions) Hit Total Coverage
Test: CP2K Regtests (git:2fce0f8) Lines: 62 62 100.0 %
Date: 2024-12-21 06:28:57 Functions: 2 2 100.0 %

          Line data    Source code
       1             : !--------------------------------------------------------------------------------------------------!
       2             : !   CP2K: A general program to perform molecular dynamics simulations                              !
       3             : !   Copyright 2000-2024 CP2K developers group <https://cp2k.org>                                   !
       4             : !                                                                                                  !
       5             : !   SPDX-License-Identifier: GPL-2.0-or-later                                                      !
       6             : !--------------------------------------------------------------------------------------------------!
       7             : 
       8             : ! **************************************************************************************************
       9             : !> \brief builds the input structure for the EMBED environment: clone of MIXED environment
      10             : !> \author Vladimir Rybkin - University of Zurich
      11             : ! **************************************************************************************************
      12             : MODULE input_cp2k_embed
      13             :    USE bibliography,                    ONLY: Heaton_Burgess2007,&
      14             :                                               Huang2011
      15             :    USE cp_output_handling,              ONLY: add_last_numeric,&
      16             :                                               cp_print_key_section_create,&
      17             :                                               low_print_level
      18             :    USE input_constants,                 ONLY: dfet,&
      19             :                                               dmfet
      20             :    USE input_keyword_types,             ONLY: keyword_create,&
      21             :                                               keyword_release,&
      22             :                                               keyword_type
      23             :    USE input_section_types,             ONLY: section_add_keyword,&
      24             :                                               section_add_subsection,&
      25             :                                               section_create,&
      26             :                                               section_release,&
      27             :                                               section_type
      28             :    USE input_val_types,                 ONLY: integer_t
      29             :    USE string_utilities,                ONLY: s2a
      30             : #include "./base/base_uses.f90"
      31             : 
      32             :    IMPLICIT NONE
      33             :    PRIVATE
      34             : 
      35             :    LOGICAL, PRIVATE, PARAMETER :: debug_this_module = .TRUE.
      36             :    CHARACTER(len=*), PARAMETER, PRIVATE :: moduleN = 'input_cp2k_embed'
      37             : 
      38             :    PUBLIC :: create_embed_section
      39             : 
      40             : CONTAINS
      41             : 
      42             : ! **************************************************************************************************
      43             : !> \brief Create the input section for EMBED: clone of the subroutines for MIXED
      44             : !> \param section the section to create
      45             : !> \author Vladimir Rybkin
      46             : ! **************************************************************************************************
      47        9174 :    SUBROUTINE create_embed_section(section)
      48             :       TYPE(section_type), POINTER                        :: section
      49             : 
      50             :       TYPE(keyword_type), POINTER                        :: keyword
      51             :       TYPE(section_type), POINTER                        :: sub2section, sub3section, subsection
      52             : 
      53        9174 :       CPASSERT(.NOT. ASSOCIATED(section))
      54             :       CALL section_create(section, __LOCATION__, name="EMBED", &
      55             :                           description="This section contains all information to run embedded "// &
      56             :                           "calculations.", &
      57             :                           n_keywords=1, n_subsections=0, repeats=.FALSE., &
      58       27522 :                           citations=(/Huang2011, Heaton_Burgess2007/))
      59        9174 :       NULLIFY (keyword, subsection)
      60             : 
      61             :       CALL keyword_create(keyword, __LOCATION__, name="EMBED_METHOD", &
      62             :                           description="Select DFET or DMFET.", &
      63             :                           usage="EMBED_METHOD DFET", &
      64             :                           default_i_val=dfet, &
      65             :                           enum_c_vals=s2a("DFET", "DMFET"), &
      66             :                           enum_desc=s2a("DFET", "DMFET"), &
      67        9174 :                           enum_i_vals=(/dfet, dmfet/))
      68        9174 :       CALL section_add_keyword(section, keyword)
      69        9174 :       CALL keyword_release(keyword)
      70             : 
      71             :       ! Group partitioning
      72             :       CALL keyword_create(keyword, __LOCATION__, name="GROUP_PARTITION", &
      73             :                           description="gives the exact number of processors for each group."// &
      74             :                           " If not specified processors allocated will be equally distributed for"// &
      75             :                           " the specified subforce_eval, trying to build a number of groups equal to the"// &
      76             :                           " number of subforce_eval specified.", &
      77        9174 :                           usage="group_partition  2 2 4 2 4 ", type_of_var=integer_t, n_var=-1)
      78        9174 :       CALL section_add_keyword(section, keyword)
      79        9174 :       CALL keyword_release(keyword)
      80             : 
      81             :       CALL keyword_create(keyword, __LOCATION__, name="NGROUPS", variants=(/"NGROUP"/), &
      82             :                           description="Gives the wanted number of groups. Currently must be set to 1", &
      83       18348 :                           usage="ngroups 4", type_of_var=integer_t, default_i_val=1)
      84        9174 :       CALL section_add_keyword(section, keyword)
      85        9174 :       CALL keyword_release(keyword)
      86             : 
      87             :       ! Mapping of atoms
      88        9174 :       NULLIFY (sub2section, sub3section)
      89             :       CALL section_create(subsection, __LOCATION__, name="MAPPING", &
      90             :                           description="Defines the mapping of atoms for the different force_eval with the mixed force_eval."// &
      91             :                           " The default is to have a mapping 1-1 between atom index (i.e. all force_eval share the same"// &
      92             :                           " geometrical structure). The mapping is based on defining fragments and the mapping the"// &
      93             :                           " fragments between the several force_eval and the mixed force_eval", &
      94        9174 :                           n_keywords=1, n_subsections=0, repeats=.TRUE.)
      95             : 
      96             :       ! Mixed force_eval
      97             :       CALL section_create(sub2section, __LOCATION__, name="FORCE_EVAL_EMBED", &
      98             :                           description="Defines the fragments for the embedding force_eval (reference)", &
      99        9174 :                           n_keywords=1, n_subsections=0, repeats=.TRUE.)
     100             : 
     101             :       CALL section_create(sub3section, __LOCATION__, name="FRAGMENT", &
     102             :                           description="Fragment definition", &
     103        9174 :                           n_keywords=1, n_subsections=0, repeats=.TRUE.)
     104             : 
     105             :       CALL keyword_create(keyword, __LOCATION__, name="_SECTION_PARAMETERS_", &
     106             :                           description="Defines the index of the fragment defined", &
     107        9174 :                           usage="<INTEGER>", type_of_var=integer_t, n_var=1)
     108        9174 :       CALL section_add_keyword(sub3section, keyword)
     109        9174 :       CALL keyword_release(keyword)
     110             : 
     111             :       CALL keyword_create(keyword, __LOCATION__, name="_DEFAULT_KEYWORD_", &
     112             :                           description="Starting and ending atomic index defining one fragment must be provided", &
     113        9174 :                           usage="{Integer} {Integer}", type_of_var=integer_t, n_var=2, repeats=.TRUE.)
     114        9174 :       CALL section_add_keyword(sub3section, keyword)
     115        9174 :       CALL keyword_release(keyword)
     116             : 
     117        9174 :       CALL section_add_subsection(sub2section, sub3section)
     118        9174 :       CALL section_release(sub3section)
     119        9174 :       CALL section_add_subsection(subsection, sub2section)
     120        9174 :       CALL section_release(sub2section)
     121             : 
     122             :       ! All other force_eval
     123             :       CALL section_create(sub2section, __LOCATION__, name="FORCE_EVAL", &
     124             :                           description="Defines the fragments and the mapping for each force_eval (an integer index (ID) "// &
     125             :                           "needs to be provided as parameter)", &
     126        9174 :                           n_keywords=1, n_subsections=0, repeats=.TRUE.)
     127             : 
     128             :       CALL keyword_create( &
     129             :          keyword, __LOCATION__, name="DEFINE_FRAGMENTS", &
     130             :          description="Specify the fragments definition of the force_eval through the fragments of the"// &
     131             :          " force_eval_embed. This avoids the pedantic definition of the fragments for the force_eval,"// &
     132             :          " assuming the order of the fragments for the specified force_eval is the same as the sequence"// &
     133             :          " of integers provided. Easier to USE should be preferred to the specification of the single fragments.", &
     134        9174 :          usage="DEFINE_FRAGMENTS <INTEGER> .. <INTEGER>", type_of_var=integer_t, n_var=-1)
     135        9174 :       CALL section_add_keyword(sub2section, keyword)
     136        9174 :       CALL keyword_release(keyword)
     137             : 
     138             :       CALL keyword_create(keyword, __LOCATION__, name="_SECTION_PARAMETERS_", &
     139             :                           description="Defines the index of the force_eval for which fragments and mappings are provided", &
     140        9174 :                           usage="<INTEGER>", type_of_var=integer_t, n_var=1)
     141        9174 :       CALL section_add_keyword(sub2section, keyword)
     142        9174 :       CALL keyword_release(keyword)
     143             : 
     144             :       CALL section_create(sub3section, __LOCATION__, name="FRAGMENT", &
     145             :                           description="Fragment definition", &
     146        9174 :                           n_keywords=1, n_subsections=0, repeats=.TRUE.)
     147             : 
     148             :       CALL keyword_create(keyword, __LOCATION__, name="_SECTION_PARAMETERS_", &
     149             :                           description="Defines the index of the fragment defined", &
     150        9174 :                           usage="<INTEGER>", type_of_var=integer_t, n_var=1)
     151        9174 :       CALL section_add_keyword(sub3section, keyword)
     152        9174 :       CALL keyword_release(keyword)
     153             : 
     154             :       CALL keyword_create(keyword, __LOCATION__, name="_DEFAULT_KEYWORD_", &
     155             :                           description="Starting and ending atomic index defining one fragment must be provided", &
     156        9174 :                           usage="{Integer} {Integer}", type_of_var=integer_t, n_var=2, repeats=.FALSE.)
     157        9174 :       CALL section_add_keyword(sub3section, keyword)
     158        9174 :       CALL keyword_release(keyword)
     159             : 
     160             :       CALL keyword_create(keyword, __LOCATION__, name="MAP", &
     161             :                           description="Provides the index of the fragment of the MIXED force_eval mapped on the"// &
     162             :                           " locally defined fragment.", &
     163        9174 :                           usage="MAP <INTEGER>", type_of_var=integer_t, n_var=1, repeats=.FALSE.)
     164        9174 :       CALL section_add_keyword(sub3section, keyword)
     165        9174 :       CALL keyword_release(keyword)
     166             : 
     167        9174 :       CALL section_add_subsection(sub2section, sub3section)
     168        9174 :       CALL section_release(sub3section)
     169        9174 :       CALL section_add_subsection(subsection, sub2section)
     170        9174 :       CALL section_release(sub2section)
     171             : 
     172        9174 :       CALL section_add_subsection(section, subsection)
     173        9174 :       CALL section_release(subsection)
     174             : 
     175        9174 :       CALL create_print_embed_section(subsection)
     176        9174 :       CALL section_add_subsection(section, subsection)
     177        9174 :       CALL section_release(subsection)
     178        9174 :    END SUBROUTINE create_embed_section
     179             : 
     180             : ! **************************************************************************************************
     181             : !> \brief Create the print section for embedding
     182             : !> \param section the section to create
     183             : !> \author Vladimir Rybkin
     184             : ! **************************************************************************************************
     185        9174 :    SUBROUTINE create_print_embed_section(section)
     186             :       TYPE(section_type), POINTER                        :: section
     187             : 
     188             :       TYPE(section_type), POINTER                        :: print_key
     189             : 
     190        9174 :       CPASSERT(.NOT. ASSOCIATED(section))
     191             :       CALL section_create(section, __LOCATION__, name="print", &
     192             :                           description="Section of possible print options in EMBED env.", &
     193        9174 :                           n_keywords=0, n_subsections=1, repeats=.FALSE.)
     194             : 
     195        9174 :       NULLIFY (print_key)
     196             : 
     197             :       CALL cp_print_key_section_create(print_key, __LOCATION__, "PROGRAM_RUN_INFO", &
     198             :                                        description="Controls the printing of information during the evaluation of "// &
     199             :                                        "the embedding environment. ", &
     200        9174 :                                        print_level=low_print_level, add_last=add_last_numeric, filename="__STD_OUT__")
     201        9174 :       CALL section_add_subsection(section, print_key)
     202        9174 :       CALL section_release(print_key)
     203             : 
     204        9174 :    END SUBROUTINE create_print_embed_section
     205             : 
     206             : END MODULE input_cp2k_embed

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